Publications

2022

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See detailAbstract: The Importance of Dataset Choice Lessons Learned from COVID-19 X-ray Imaging Models
Garcia Santa Cruz, Beatriz; Bossa, Matias Nicolas; Soelter, Jan; Hertel, Frank; Husch, Andreas

in Bildverarbeitung für die Medizin 2022. Informatik aktuell. Springer Vieweg, Wiesbaden. (2022, April 05)

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See detailThe effect of dataset confounding on predictions of deep neural networks for medical imaging
Garcia Santa Cruz, Beatriz; Husch, Andreas; Hertel, Frank

in Vol. 3 (2022): Proceedings of the Northern Lights Deep Learning Workshop 2022 (2022, April 18)

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See detailGeneralising from conventional pipelines using deep learning in high‑throughput screening workfows
Garcia Santa Cruz, Beatriz; Sölter, Jan; Gomez Giro, Gemma; Saraiva, Claudia; Sabaté Soler, Sonia; Modamio Chamarro, Jenifer; Barmpa, Kyriaki; Schwamborn, Jens Christian; Hertel, Frank; Jarazo, Javier; Husch, Andreas

in Scientific Reports (2022)

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2021

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See detailTherapeutic maps for a sensor-based evaluation of deep brain stimulation programming
Bremm, René Peter; Berthold; Krüger, Rejko; Koch, Klaus Peter; Goncalves, Jorge; Hertel, Frank

in Biomedizinische Technik. Biomedical Engineering (2021)

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See detailPublic Covid-19 X-ray datasets and their impact on model bias - a systematic review of a significant problem
Garcia Santa Cruz, Beatriz; Bossa, Matias Nicolas; Sölter, Jan; Husch, Andreas

in Medical Image Analysis (2021), 74

See detailModel bias and its impact on computer-aided diagnosis: A data-centric approach
Garcia Santa Cruz, Beatriz; Bossa, Matias Nicolas; Sölter, Jan; Husch, Andreas; Hertel, Frank

Poster (2021, August)

See detailThe need of standardised metadata to encode causal relationships: Towards safer data-driven machine learning biological solutions
Garcia Santa Cruz, Beatriz; Vega Moreno, Carlos Gonzalo; Hertel, Frank

Scientific Conference (2021, November 16)

See detailDBS Imaging Methods II: Electrode Localization
Husch, Andreas; Hertel, Frank

in Horn, Andreas (Ed.) Connectomic Deep Brain Stimulation (2021)

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See detailIntraoperative discrimination of native meningioma and dura mater by Raman spectroscopy
Jelke, Finn; Mirizzi, Giulia; Borgmann, Felix Kleine; Husch, Andreas; Slimani, Rédouane; Klamminger, Gilbert Georg; Klein, Karoline; Mombaerts, Laurent; Gerardy, Jean-Jacques; Mittelbronn, Michel; Hertel, Frank

in Scientific Reports (2021)

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See detailModelling COVID-19 dynamics and potential for herd immunity by vaccination in Austria, Luxembourg and Sweden
Kemp, Francoise; Proverbio, Daniele; Aalto, Atte; Mombaerts, Laurent; Fouquier d'herouël, Aymeric; Husch, Andreas; Ley, Christophe; Goncalves, Jorge; Skupin, Alexander; Magni, Stefano

in Journal of Theoretical Biology (2021)

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See detailApplication of Raman Spectroscopy for Detection of Histologically Distinct Areas in Formalin-fixed Paraffin-embedded (FFPE) Glioblastoma
Klamminger, Gilbert Georg; Gerardy, Jean-Jacques; Jelke, Finn; Mirizzi, Giulia; Slimani, Rédouane; Klein, Karoline; Husch, Andreas; Hertel, Frank; Mittelbronn, Michel; Kleine-Borgmann, Felix B.

in Neuro-Oncology Advances (2021)

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See detailDifferentiation of primary CNS lymphoma and glioblastoma using Raman spectroscopy and machine learning algorithms
Klamminger, Gilbert Georg; Klein, Karoline; Mombaerts, Laurent; Jelke, Finn; Mirizzi, Giulia; Slimani, Rédouane; Husch, Andreas; Mittelbronn, Michel; Hertel, Frank; Borgmann, Felix Bruno Kleine

in Free Neuropathology (2021), 2

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See detailDynamical SPQEIR model assesses the effectiveness of non-pharmaceutical interventions against COVID-19 epidemic outbreaks.
Proverbio, Daniele; Kemp, Francoise; Magni, Stefano; Husch, Andreas; Aalto, Atte; Mombaerts, Laurent; Skupin, Alexander; Goncalves, Jorge; Ameijeiras-Alonso, Jose; Ley, Christophe

in PloS one (2021), 16(5), 0252019

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See detailRapid Artificial Intelligence Solutions in a Pandemic - The COVID-19-20 Lung CT Lesion Segmentation Challenge.
Roth, Holger; Xu, Ziyue; Diez, Carlos Tor; Jacob, Ramon Sanchez; Zember, Jonathan; Molto, Jose; Li, Wenqi; Xu, Sheng; Turkbey, Baris; Turkbey, Evrim; Yang, Dong; Harouni, Ahmed; Rieke, Nicola; Hu, Shishuai; Isensee, Fabian; Tang, Claire; Yu, Qinji; Sölter, Jan; Zheng, Tong; Liauchuk, Vitali; Zhou, Ziqi; Moltz, Jan; Oliveira, Bruno; Xia, Yong; Maier-Hein, Klaus; Li, Qikai; Husch, Andreas; Zhang, Luyang; Kovalev, Vassili; Kang, Li; Hering, Alessa; Vilaça, João; Flores, Mona; Xu, Daguang; Wood, Bradford; Linguraru, Marius

E-print/Working paper (2021)

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See detailLeveraging state-of-the-art architectures by enriching training information - a case study
Sölter, Jan; Proverbio, Daniele; Baniasadi, Mehri; Bossa, Matias Nicolas; Vlasov, Vanja; Garcia Santa Cruz, Beatriz; Husch, Andreas

Speeches/Talks (2021)

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See detailAutomated Deep Learning-based Segmentation of Brain, SEEG and DBS Electrodes on CT Images.
Vlasov, Vanja; Bofferding, Marie; Marx, Loic Marc; Zhang, Chencheng; Goncalves, Jorge; Husch, Andreas; Hertel, Frank

in Bildverarbeitung für die Medizin 2021 (2021)

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2020

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See detailImpressive weight gain after deep brain stimulation of nucleus accumbens in treatment- ­ resistant bulimic anorexia nervosa
Arroteia, Isabel Fernandes; Husch, Andreas; Baniasadi, Mehri; Hertel, Frank

in BMJ Case Reports (2020)

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See detailFastField: An Open-Source Toolbox for Efficient Approximation of Deep Brain Stimulation Electric Fields
Baniasadi, Mehri; Proverbio, Daniele; Goncalves, Jorge; Hertel, Frank; Husch, Andreas

in NeuroImage (2020)

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See detailAnalysis and visualisation of tremor dynamics in deep brain stimulation patients
Bremm, René Peter; Koch, Klaus Peter; Krüger, Rejko; Goncalves, Jorge; Hertel, Frank

in Current Directions in Biomedical Engineering (2020), 6(3), 4

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See detailA rule-based expert system for real-time feedback-control in deep brain stimulation
Bremm, René Peter; Koch, Klaus Peter; Krüger, Rejko; Hertel, Frank; Goncalves, Jorge

in Current Directions in Biomedical Engineering (2020), 6(3), 4

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See detailOn the Composition and Limitations of Publicly Available COVID-19 X-Ray Imaging Datasets
Garcia Santa Cruz, Beatriz; Sölter, Jan; Bossa, Matias Nicolas; Husch, Andreas

E-print/Working paper (2020)

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See detailPatient-derived organoids and orthotopic xenografts of primary and recurrent gliomas represent relevant patient avatars for precision oncology.
Golebiewska, Anna; Hau, Ann-Christin; Oudin, Anaïs; Stieber, Daniel; Yabo, Yahaya A.; Baus, Virginie; Barthelemy, Vanessa; Klein, Eliane; Bougnaud, Sébastien; Keunen, Olivier; Wantz, May; Michelucci, Alessandro; Neirinckx, Virginie; Muller, Arnaud; Kaoma, Tony; Nazarov, Petr V.; Azuaje, Francisco; De Falco, Alfonso; Flies, Ben; Richart, Lorraine; Poovathingal, Suresh; Arns, Thais; Grzyb, Kamil; Mock, Andreas; Herold-Mende, Christel; Steino, Anne; Brown, Dennis; May, Patrick; Miletic, Hrvoje; Malta, Tathiane M.; Noushmehr, Houtan; Kwon, Yong-Jun; Jahn, Winnie; Klink, Barbara; Tanner, Georgette; Stead, Lucy F.; Mittelbronn, Michel; Skupin, Alexander; Hertel, Frank; Bjerkvig, Rolf; Niclou, Simone

in Acta Neuropathologica (2020)

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See detailPrimary and recurrent glioma patient-derived orthotopic xenografts (PDOX) represent relevant patient avatars for precision medicine
Golebiewska, Anna; Hau, Ann-Christin; Oudin, Anais; Stieber, Daniel; Yabo, Yahaya A.; Baus, Virginie; Barthelemy, Vanessa; Klein, Eliane; Bougnaud, Sebastien; Keunen, Olivier; Wantz, May; Michelucci, Alessandro; Neirinckx, Virginie; Muller, Arnaud; Kaoma, Tony; Nazarov, Petr V.; Azuaje, Francisco; De Falco, Alfonso; Flies, Ben; Richart, Lorraine; Poovathingal, Suresh; Arns, Thais; Grzyb, Kamil; Mock, Andreas; Herold-Mende, Christel; Steino, Anne; Brown, Dennis; May, Patrick; Miletic, Hrvoje; Malta, Tathiane M.; Noushmehr, Houtan; Kwon, Yong-Jun; Jahn, Winnie; Klink, Barbara; Tanner, Georgette; Stead, Lucy F.; Mittelbronn, Michel; Skupin, Alexander; Hertel, Frank; Bjerkvig, Rolf; Niclou, Simone

E-print/Working paper (2020)

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See detailAssessing suppression strategies against epidemicoutbreaks like COVID-19: the SPQEIR model
Proverbio, Daniele; Kemp, Francoise; Magni, Stefano; Husch, Andreas; Aalto, Atte; Mombaerts, Laurent; Goncalves, Jorge; Skupin, Alexander; Ameijeiras-Alonso, Jose; Ley, Christophe

E-print/Working paper (2020)

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2019

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See detailFrom tech to bench: Deep Learning pipeline for image segmentation of high-throughput high-content microscopy data
Garcia Santa Cruz, Beatriz; Jarazo, Javier; Saraiva, Claudia; Gomez Giro, Gemma; Modamio Chamarro, Jennifer; Sabaté Soler, Sonia; Kyriaki, Barmpa; Antony, Paul; Schwamborn, Jens Christian; Hertel, Frank; Husch, Andreas

Poster (2019, November 29)

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See detailDeep Learning Quality Control for High-Throughput High-Content Screening Microscopy Images
Garcia Santa Cruz, Beatriz; Jarazo, Javier; Schwamborn, Jens Christian; Hertel, Frank; Husch, Andreas

Poster (2019, October 10)

See detailPATH-29. POTENTIAL OF RAMAN SPECTROSCOPY IN ONCOLOGICAL NEUROSURGERY
Kleine Borgmann, Felix; Husch, Andreas; Slimani, Redouane; Jelke, Finn; Mirizzi, Giulia; Klein, Karoline; Mittelbronn, Michel; Hertel, Frank

Poster (2019)

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See detailHabenula deep brain stimulation for refractory bipolar disorder.
Zhang, Chencheng; Kim, Seung-Goo; Li, Dianyou; Zhang, Yingying; Li, Yan; Husch, Andreas; Hertel, Frank; Yan, Fuhua; Voon, Valerie; Sun, Bomin

in Brain stimulation (2019)

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2018

See detailDystone Bewegungsstörungen bei Kindern
Hertel, Frank

in Bächli, Heidi; Lütschg, Jürg; Messing-Jünger, Martina (Eds.) Pädiatrische Neurochirurgie (2018)

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See detailLead-DBS v2: Towards a comprehensive pipeline for deep brain stimulation imaging.
Horn, Andreas; Li, Ningfei; Dembek, Till A.; Kappel, Ari; Boulay, Chadwick; Ewert, Siobhan; Tietze, Anna; Husch, Andreas; Perera, Thushara; Neumann, Wolf-Julian; Reisert, Marco; Si, Hang; Oostenveld, Robert; Rorden, Christopher; Yeh, Fang-Cheng; Fang, Qianqian; Herrington, Todd M.; Vorwerk, Johannes; Kuhn, Andrea A.

in NeuroImage (2018)

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See detailPaCER - A fully automated method for electrode trajectory and contact reconstruction in deep brain stimulation
Husch, Andreas; Petersen, Mikkel V.; Gemmar, Peter; Goncalves, Jorge; Hertel, Frank

in NeuroImage: Clinical (2018), 17

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See detailPost-operative deep brain stimulation assessment: Automatic data integration and report generation
Husch, Andreas; Petersen, Mikkel V.; Gemmar, Peter; Goncalves, Jorge; Sunde, Niels; Hertel, Frank

in Brain Stimulation (2018)

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See detailUsing automated electrode localization to guide stimulation management in DBS
Petersen, Mikkel V.; Husch, Andreas; Parsons, Christine E.; Lund, Torben E.; Sunde, Niels; Østergaard, Karen

in Annals of Clinical and Translational Neurology (2018), 0(0),

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2017

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See detailShape-aware surface reconstruction from sparse 3D point-clouds
Bernard, Florian; Salamanca Mino, Luis; Thunberg, Johan; Tack, Alexander; Jentsch, Dennis; Lamecker, Hans; Zachow, Stefan; Hertel, Frank; Goncalves, Jorge; Gemmar, Peter

in Medical Image Analysis (2017), 38

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See detailIntegration of sparse electrophysiological measurements with preoperative MRI using 3D surface estimation in deep brain stimulation surgery
Husch, Andreas; Gemmar, Peter; Thunberg, Johan; Hertel, Frank

in Webster, Robert; Fei, Baowei (Eds.) Medical Imaging 2017: Image-Guided Procedures, Robotic Interventions, and Modeling (2017, February 14)

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2016

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See detailLinear Shape Deformation Models with Local Support using Graph-based Structured Matrix Factorisation
Bernard, Florian; Gemmar, Peter; Hertel, Frank; Goncalves, Jorge; Thunberg, Johan

in Linear Shape Deformation Models with Local Support using Graph-based Structured Matrix Factorisation (2016)

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See detailFast Correspondences for Statistical Shape Models of Brain Structures
Bernard, Florian; Vlassis, Nikos; Gemmar, Peter; Husch, Andreas; Thunberg, Johan; Goncalves, Jorge; Hertel, Frank

in SPIE Medical Imaging (2016, March)

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2015

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See detailShape-aware 3D Interpolation using Statistical Shape Models
Bernard, Florian; Salamanca Mino, Luis; Thunberg, Johan; Hertel, Frank; Goncalves, Jorge; Gemmar, Peter

in Symposium on Statistical Shape Models and Applications, Delemont, Switzerland, October 2015 (2015, October)

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See detailA solution for Multi-Alignment by Transformation Synchronisation
Bernard, Florian; Thunberg, Johan; Gemmar, Peter; Hertel, Frank; Husch, Andreas; Goncalves, Jorge

in The proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR) (2015)

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See detailTransitively Consistent and Unbiased Multi-Image Registration Using Numerically Stable Transformation Synchronisation
Bernard, Florian; Thunberg, Johan; Salamanca Mino, Luis; Gemmar, Peter; Hertel, Frank; Goncalves, Jorge; Husch, Andreas

in MIDAS Journal (2015)

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See detailDiffusion tensor imaging--arcuate fasciculus and the importance for the neurosurgeon.
Hana, Ardian; Dooms, Georges; Boecher-Schwarz, Hans; Hertel, Frank

in Clinical neurology and neurosurgery (2015), 132

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See detailVisualization of the medial forebrain bundle using diffusion tensor imaging.
Hana, Ardian; Hana, Anisa; Dooms, Georges; Boecher-Schwarz, Hans; Hertel, Frank

in Frontiers in Neuroanatomy (2015), 9

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See detailSusceptibility-Weighted MRI for Deep Brain Stimulation: Potentials in Trajectory Planning
Hertel, Frank; Husch, Andreas; Dooms, Georges; Bernard, Florian; Gemmar, Peter

in Stereotactic & Functional Neurosurgery (2015), 93(5), 303-308

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See detailAssessment of Electrode Displacement and Deformation with Respect to Pre-Operative Planning in Deep Brain Stimulation
Husch, Andreas; Gemmar, Peter; Lohscheller, Jörg; Bernard, Florian; Hertel, Frank

in Handels, Heinz; Deserno, Thomas Martin; Meinzer, Hans-Peter; Tolxdorff, Thomas (Eds.) Bildverarbeitung für die Medizin 2015 (2015)

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See detailStabilization with the Dynamic Cervical Implant: a novel treatment approach following cervical discectomy and decompression.
Matge, Guy; Berthold, Christophe; Gunness, Vimal Raj Nitish; Hana, Ardian; Hertel, Frank

in Journal of Neurosurgery. Spine (2015), 22(3), 237-45

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2014

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See detailAn Extensible Development Environment for 3D Segmentations based on Active Shape Models
Bernard, Florian; Gemmar, Peter; Husch, Andreas; Hertel, Frank

in Shape Symposium (2014)

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See detailImproving the Consistency of Manual Deep Brain Structure Segmentations by Combining Variational Interpolation, Simultaneous Multi-Modality Visualisation and Histogram Equilisation
Bernard, Florian; Gemmar, Peter; Husch, Andreas; Saleh, Christian; Neb, Heinrich; Dooms, Georges; Hertel, Frank

in Biomedizinische Technik. Biomedical Engineering (2014), 59(1), 131-134

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See detailHolmes tremor in a patient with progressive multifocal leukoencephalopathy.
Gunness, Vimal Raj Nitish; Dooms, Georges; Wauschkuhn, Bernd; Feiden, Wolfgang; Hertel, Frank

in Surgical Neurology International (2014), 5(Suppl 8), 413-5

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See detailDTI of the visual pathway - white matter tracts and cerebral lesions.
Hana, Ardian; Husch, Andreas; Gunness, Vimal Raj Nitish; Berthold, Christophe; Hana, Anisa; Dooms, Georges; Boecher Schwarz, Hans; Hertel, Frank

in Journal of Visualized Experiments (2014), (90),

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See detailGlioblastomas are composed of genetically divergent clones with distinct tumourigenic potential and variable stem cell-associated phenotypes.
Stieber, Daniel; Golebiewska, Anna; Evers, Lisa; Lenkiewicz, Elizabeth; Brons, Nicolaas H. C.; Nicot, Nathalie; Oudin, Anais; Bougnaud, Sebastien; Hertel, Frank; Bjerkvig, Rolf; Vallar, Laurent; Barrett, Michael T.; Niclou, Simone P.

in Acta Neuropathologica (2014), 127(2), 203-19

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2013

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See detailSide population in human glioblastoma is non-tumorigenic and characterizes brain endothelial cells.
Golebiewska, Anna; Bougnaud, Sebastien; Stieber, Daniel; Brons, Nicolaas H. C.; Vallar, Laurent; Hertel, Frank; Klink, Barbara; Schrock, Evelin; Bjerkvig, Rolf; Niclou, Simone P.

in Brain : a journal of neurology (2013), 136(Pt 5), 1462-75

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See detailA new rechargeable device for deep brain stimulation: a prospective patient satisfaction survey.
Timmermann, Lars; Schupbach, Michael; Hertel, Frank; Wolf, Elisabeth; Eleopra, Roberto; Franzini, Angelo; Servello, Domenico; Skogseid, Inger-Marie; Rumia, Jordi; Aliaga, Antonio Salvador; Barbe, Michael T.; Pauls, K. Amande M.; Lin, Jean-Pierre; Moro, Elena; Lloyd, Andrew; Maarouf, Mohammad

in European Neurology (2013), 69(4), 193-9

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2012

See detailMethod for identification of anatomical landmarks
Gielen, F. L. H.; Hertel, Frank; Gemmar, P.; Appenrodt, P.

Report (2012)

See detailSystem for navigating a planned procedure within a body
Gielen, F. L. H.; Hertel, Frank; Gemmar, P.; Appenrodt, P.

Report (2012)

See detailMethod for planning a surgical procedure
Gielen, Frans L. H.; Hertel, Frank; Gemmar, Peter; Appenrodt, Peter

Report (2012)

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2008

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See detailImpaired performance on the Wisconsin Card Sorting Test under left- when compared to right-sided deep brain stimulation of the subthalamic nucleus in patients with Parkinson's disease.
Lueken, Ulrike; Schwarz, Michaela; Hertel, Frank; Schweiger, Elisabeth; Wittling, Werner

in Journal of neurology (2008), 255(12), 1940-8

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2006

See detailKapitel 19 - ZNS-Tumoren
Bettag, Martin; Hertel, Frank; Preiß, Joachim; Schmieder, Achim

in Pfeifer, Ben; ???; Preiß, Joachim; ???; Unger, Clemens (Eds.) Onkologie integrativ (2006)

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See detailUnilateral Holmes tremor, clearly responsive to cerebrospinal fluid release, in a patient with an ischemic midbrain lesion and associated chronic hydrocephalic ventricle enlargement. Case report.
Hertel, Frank; Zuchner, Mark; Decker, Christian; Erken, Edward; Libri, Stefani; Schmitt, Marion; Bettag, Martin

in Journal of Neurosurgery (2006), 104(3), 448-51

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See detailImplantation of electrodes for deep brain stimulation of the subthalamic nucleus in advanced Parkinson's disease with the aid of intraoperative microrecording under general anesthesia.
Hertel, Frank; Zuchner, Mark; Weimar, Inge; Gemmar, Peter; Noll, Bernhard; Bettag, Martin; Decker, Christian

in Neurosurgery (2006), 59(5), 11381138

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2005

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See detailPerfusion-weighted magnetic resonance imaging in patients with vasospasm: a useful new tool in the management of patients with subarachnoid hemorrhage.
Hertel, Frank; Walter, Christof; Bettag, Martin; Morsdorf, Maria

in Neurosurgery (2005), 56(1), 28-3535

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See detailAlteration of cerebral perfusion in patients with idiopathic normal pressure hydrocephalus measured by 3D perfusion weighted magnetic resonance imaging.
Walter, Christof; Hertel, Frank; Naumann, E.; Morsdorf, M.

in Journal of neurology (2005), 252(12), 1465-71

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2002

See detailComputerassistierte Hirnoperationen
Bettag, Martin; Busert, Christoph; Hertel, Frank

in Laubach, Ester; Mau, Frank; Mau, Thomas (Eds.) Medizin im 21. Jahrhundert: Molekulare Medizin, Mikrotherapie und High-Tech-Operationen (2002)

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Undated

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