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Dr. Cédric Laczny

Cédric Laczny

Research scientist

Faculté ou Centre Luxembourg Centre for Systems Biomedicine
Department Systems Ecology
Adresse postale Campus Belval, Université du Luxembourg
7, Avenue des Hauts Fourneaux
L-4362 Esch-sur-Alzette
Bureau sur le campus BioTech I, 4.10B
E-mail
Téléphone (+352) 46 66 44 9070

Project manager in the Systems Ecology Group (Wilmes Lab)

Last updated on: jeudi 17 juin 2021

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2023

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See detailAltered infective competence of the human gut microbiome in COVID-19
de Nies, Laura; Galata, Valentina; Martin-Gallausiaux, Camille; Despotovic, Milena; Busi, Susheel Bhanu; Snoeck, Chantal J.; Delacour, Lea; Budagavi, Deepthi Poornima; Laczny, Cedric Christian; Habier, Janine; Lupu, Paula-Cristina; Halder, Rashi; Fritz, Joëlle V.; Marques, Tainá; Sandt, Estelle; O'Sullivan, Marc Paul; Ghosh, Soumyabrata; Satagopam, Venkata; Consortium, CON-Vince; Krüger, Rejko; Fagherazzi, Guy; Ollert, Markus; He, Feng; May, Patrick; Wilmes, Paul

in Microbiome (2023), 11(1), 46

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2022

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See detailSnapShot: The Expobiome Map
Aho, Velma; Ostaszewski, Marek; Martin-Gallausiaux, Camille; Laczny, Cedric Christian; Schneider, Jochen; Wilmes, Paul

in Cell Host and Microbe (2022), 30(9), 1340

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See detailBioremediation of 27 Micropollutants by Symbiotic Microorganisms of Wetland Macrophytes
Brunhoferova, Hana; Venditti, Silvia; Laczny, Cedric Christian; Lebrun, Laura; Hansen, Joachim

in Sustainability (2022), 14(7), 3944

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See detailAlterations of oral microbiota and impact on the gut microbiome in type 1 diabetes mellitus revealed by integrated multi-omic analyses
Kunath, Benoît; Hickl, Oskar; Teixeira Queiros, Pedro; Martin-Gallausiaux, Camille; Lebrun, Laura; Halder, Rashi; Laczny, Cedric Christian; Schmidt, Thomas Sebastian; Hayward, Matthew; Becher, Dorte; Heintz-Buschart, Anna; de Beaufort, Carine; Bork, Peer; May, Patrick; Wilmes, Paul

in Microbiome (2022)

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See detailAn archaeal compound as a driver of Parkinson’s disease pathogenesis
Trezzi, Jean-Pierre; Aho, Velma; Jäger, Christian; Schade, Sebastian; Janzen, Annette; Hickl, Oskar; Kunath, Benoit; Thomas, Melanie; Schmit, Kristopher; Garcia, Pierre; Sciortino, Alessia; Martin-Gallausiaux, Camille; Halder, Rashi; Huarte, Oihane Uriarte; Heurtaux, Tony; Heins-Marroquin, Ursula; Gomez-Giro, Gemma; Weidenbach, Katrin; Delacour, Lea; Laczny, Cedric Christian; Novikova, Polina; Ramiro-Garcia, Javier; Singh, Randolph; Andújar, Begoña Talavera; Lebrun, Laura; Daujeumont, Annegrait; Habier, Janine; Dong, Xiangyi; Gavotto, Floriane; Heintz-Buschart, Anna; Schneider, Jochen; Jehmlich, Nico; Bergen, Martin Von; Schymanski, Emma; Schmitz, Ruth; Schwamborn, Jens Christian; Glaab, Enrico; Linster, Carole; Kitami, Toshimori; Buttini, Manuel; May, Patrick; Trenkwalder, Claudia; Oertel, Wolfgang; Mollenhauer, Brit; Wilmes, Paul

E-print/Working paper (2022)

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See detailThe gut microbiome molecular complex in human health and disease
Wilmes, Paul; Martin-Gallausiaux, Camille; Ostaszewski, Marek; Aho, Velma; Novikova, Polina; Laczny, Cedric Christian; Schneider, Jochen

in Cell Host and Microbe (2022), 30(9), 1201-1206

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2021

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See detailPathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data
de Nies, Laura; Lopes, Sara; Busi, Susheel Bhanu; Galata, Valentina; Heintz-Buschart, Anna; Laczny, Cedric Christian; May, Patrick; Wilmes, Paul

in Microbiome (2021)

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See detailSystematic characterization of human gut microbiome-secreted molecules by integrated multi-omics
de Saedeleer, Bianca; Malabirade, Antoine; Ramiro Garcia, Javier; Habier, Janine; Trezzi, Jean-Pierre; Peters, Samantha; Daujeumont, Annegrät; Halder, Rashi; Jäger, Christian; Busi, Susheel Bhanu; May, Patrick; Oertel, Wolfgang; Mollenhauer, Brit; Laczny, Cedric Christian; Hettich, Robert; Wilmes, Paul

in ISME Communications (2021)

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See detailFunctional meta-omics provide critical insights into long- and short-read assemblies
Galata, Valentina; Busi, Susheel Bhanu; Kunath, Benoît; de Nies, Laura; Calusinska, Magdalena; Halder, Rashi; May, Patrick; Wilmes, Paul; Laczny, Cedric Christian

in Briefings in Bioinformatics (2021)

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See detailRoles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics
Martinez Arbas, Susana; Narayanasamy, Shaman; Herold, Malte; Lebrun, Laura; Hoopmann, Michael R.; Li, Sujun; Lam, Tony J.; Kunath, Benoît J.; Hicks, Nathan D.; Liu, Cindy M.; Price, Lance B.; Laczny, Cedric Christian; Gillece, John D.; Schupp, James M.; Keim, Paul S.; Moritz, Robert L.; Faust, Karoline; Tang, Haixu; Ye, Yuzhen; Skupin, Alexander; May, Patrick; Muller, Emilie E. L.; Wilmes, Paul

in Nature Microbiology (2021), 6(1), 123--135

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2020

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See detailDichloromethane Degradation Pathway from Unsequenced Hyphomicrobium sp. MC8b Rapidly Explored by Pan-Proteomics
Hayoun, Karim; Geersens, Emilie; Laczny, Cedric Christian; Halder, Rashi; Lázaro Sánchez, Carmen; Manna, Abhijit; Bringel, Françoise; Ryckelynck, Michaël; Wilmes, Paul; Muller, Emilie; Alpha-Bazin, Armengaud; Vuilleumier, Stéphane

in Microorganisms (2020)

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See detailIntegration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance
Herold, Malte; Martinez Arbas, Susana; Narayanasamy, Shaman; Sheik, Abdul R.; Kleine-Borgmann, Luise A. K.; Lebrun, Laura; Kunath, Benoît; Roume, Hugo; Bessarab, Irina; Williams, Rohan B. H.; Gillece, John D.; Schupp, James M.; Keim, Paul S.; Jäger, Christian; Hoopman, Michael R.; Moritz, Robert L.; Ye, Yuhzen; Li, Sujun; Tang, Haixu; Heintz-Buschart, Anna; May, Patrick; Muller, Emilie E. L.; Laczny, Cedric Christian; Wilmes, Paul

in Nature Communications (2020)

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See detailRoles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics
Martinez Arbas, Susana; Narayanasamy, Shaman; Herold, Malte; Lebrun, Laura; Hoopmann, Michael R.; Li, Sujun; Lam, Tony J.; Kunath, Benoît; Hicks, Nathan D.; Liu, Cindy M.; Price, Lance B.; Laczny, Cedric Christian; Gillece, John D.; Schupp, James M.; Keim, Paul S.; Moritz, Robert L.; Faust, Karoline; Tang, Haixu; Ye, Yuzhen; Skupin, Alexander; May, Patrick; Muller, Emilie E. L.; Wilmes, Paul

in Nature Microbiology (2020)

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2018

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See detailIntegrated time-resolved multi-omics for understanding microbial niche ecology
Herold, Malte; Narayanasamy, Shaman; Martinez Arbas, Susana; Muller, Emilie; Kleine-Borgmann, Anna Luise; Lebrun, Laura; Roume, Hugo; Sheik, Abdul; Bessarab, Irina; Williams, Rohan; Gillece, John; Schupp, Jim; Keim, Paul; Jäger, Christian; Hoopmann, Michael; Li, Sujun; Tang, Haixu; Heintz, Anna; May, Patrick; Laczny, Cedric Christian; Wilmes, Paul

Poster (2018, August)

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See detailA multi-omic view of invasive genetic elements and their linked prokaryotic population dynamics within a mixed microbial community
Martinez Arbas, Susana; Narayanasamy, Shaman; Herold, Malte; Lebrun, Laura; Hicks, Nathan D.; Price, Lance B.; Gillece, John D.; Schupp, James M.; Laczny, Cedric Christian; Keim, Paul S.; Muller, Emilie E.L.; May, Patrick; Wilmes, Paul

Poster (2018, September 11)

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See detailCritical transitions in microbial communities: mobile genetic elements as drivers of the microbial community dynamics within activated sludge of wastewater treatment
Martinez Arbas, Susana; Narayanasamy, Shaman; Herold, Malte; Lebrun, Laura; Hicks, Nathan D.; Price, Lance B.; Gillece, John D.; Schupp, James M.; Lam, Tony; Laczny, Cedric Christian; Ye, Yuzhen; Keim, Paul S.; Muller, Emilie E.L.; May, Patrick; Wilmes, Paul

Poster (2018, October 19)

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See detailMicrobiome-derived Multi-omicBiomarkers for Early-stage Detection and Stratification of Parkinson's Disease
Trezzi, Jean-Pierre; Heintz, Anna; Muller, Emilie; Narayanasamy, Shaman; Jarosz, Yohan; Herold, Malte; Kaysen, Anne; Laczny, Cedric Christian; May, Patrick; Wilmes, Paul

Poster (2018, August)

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See detailMicrobiome-derived Multi-omicBiomarkers for Early-stage Detection and Stratification of Parkinson's Disease
Trezzi, Jean-Pierre; Ramiro Garcia, Javier; Laczny, Cedric Christian; Daujeumont, Annegrät; Halder, Rashi; Lebrun, Laura; Heintz, Anna; Oertel, Wolfgang; Mollenhauer, Brit; Wilmes, Paul

Poster (2018, October)

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2017

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See detailFirst draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ
Muller, Emilie; Narayanasamy, Shaman; Zeimes, Myriam; Laczny, Cedric Christian; Lebrun, Laura; Herold, Malte; Hicks, Nathan D.; Gillice, John D.; Schupp, James M.; Keim, Paul; Wilmes, Paul

in Standards in Genomic Sciences (2017), 12(64),

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See detailColonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life
Wampach, Linda; Heintz, Anna; Hogan, Angela; Muller, Emilie; Narayanasamy, Shaman; Laczny, Cedric Christian; Hugerth, Luisa; Bindl, Lutz; Bottu, Jean; Andersson, Anders; de Beaufort, Carine; Wilmes, Paul

in Frontiers in Microbiology (2017)

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2016

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See detailIdentification, recovery, and refinement of hitherto undescribed population-level genomes from the human gastrointestinal tract
Laczny, Cedric Christian; Muller, Emilie; Heintz, Anna; Herold, Malte; Lebrun, Laura; Hogan, Angela; May, Patrick; de Beaufort, Carine; Wilmes, Paul

in Frontiers in Microbiology (2016), 7(884),

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See detailIMP: a pipeline for reproducible referenceindependent integrated metagenomic and metatranscriptomic analyses
Narayanasamy, Shaman; Jarosz, Yohan; Muller, Emilie; Buschart, Anna; Herold, Malte; Kaysen, Anne; Laczny, Cedric Christian; Pinel, Nicolás; May, Patrick; Wilmes, Paul

in Genome Biology (2016), 17

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2015

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See detailPhenotypic differentiation of gastrointestinal microbes is reflected in their encoded metabolic repertoires
Bauer, Eugen; Laczny, Cedric Christian; Magnusdottir, Stefania; Wilmes, Paul; Thiele, Ines

in Microbiome (2015), 3(55), 1-13

See detailIntegrated omics analyses of the human gut microbiome in a multiplex family study of type 1 diabetes mellitus.
Buschart, Anna; May, Patrick; Laczny, Cedric Christian; Lebrun, Laura; Wampach, Linda; Hogan, Angela; Schneider, Jochen; de Beaufort, Carine; Wilmes, Paul

Poster (2015, March)

See detailDynamic change of host gastrointestinal microbiome and immune status in relation to mucosal barrier effects during chemotherapy and immune ablative intervention in humans.
Kaysen, Anne; Buschart, Anna; May, Patrick; Laczny, Cedric Christian; Narayanasamy, Shaman; Graf, N; Simon, A; Bittenbring, J; Kreis, Stephanie; Schneider, Jochen; Wilmes, Paul

Poster (2015, June)

See detailVISUALISATION AND BINNING OF METAGENOMIC DATA
Laczny, Cedric Christian

Doctoral thesis (2015)

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See detailVizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data
Laczny, Cedric Christian; Sternal, Tomasz; Plugaru, Valentin; Gawron, Piotr; Atashpendar, Arash; Margossian, Houry Hera; Coronado, Sergio; van der Maaten, Laurens; Vlassis, Nikos; Wilmes, Paul

in Microbiome (2015)

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See detailComparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks
Roume, Hugo; Buschart, Anna; Muller, Emilie; May, Patrick; Satagopam, Venkata; Laczny, Cedric Christian; Narayanasamy, Shaman; Lebrun, Laura; Hoopmann, Michael; Schupp, James; Gillece, John; Hicks, Nathan; Engelthaler, David; Sauter, Thomas; Keim, Paul; Moritz, Robert; Wilmes, Paul

in Biofilms and Microbiomes (2015), 1(15007),

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2014

See detailIntegrated Omic Analyses of the Human Gut Microbiome in a Multiplex Family Study of Type 1 Diabetes Mellitus
Heintz, Anna; May, Patrick; Laczny, Cedric Christian; Lebrun, Laura; Wampach, Linda; Hogan, Angela; Schneider, Jochen; Wilmes, Paul; De Beaufort, Carine

Poster (2014, April 30)

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See detailIdentification of condition-specific microbial populations from human metagenomic data
Laczny, Cedric Christian; May, Patrick; Vlassis, Nikos; Wilmes, Paul

Poster (2014, March)

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See detailAlignment-free Visualization of Metagenomic Data by Nonlinear Dimension Reduction
Laczny, Cedric Christian; Pinel, Nicolás; Vlassis, Nikos; Wilmes, Paul

in Scientific Reports (2014)

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See detailTowards the Identification of Condition-Specific Microbial Populations from Human Metagenomic Data
Laczny, Cedric Christian; Wilmes, Paul

in Keller, Andreas; Meese, Eckart (Eds.) Nucleic Acids as Molecular Diagnostics (2014)

See detailCommunity integrated omics links the dominance of a microbial generalist to fine-tuned resource usage
Muller, Emilie; Pinel, Nicolás; Laczny, Cedric Christian; Hoopmann, Michael; Lebrun, Laura; Roume, Hugo; May, Patrick; Hicks, Nathan; Liu, Cindy; Price, Lance; Gillece, John; Guignard, Cédric; Schupp, James; Vlassis, Nikos; Moritz, Robert; Baliga, Nitin; Keim, Paul; Wilmes, Paul

Poster (2014)

See detailCommunity integrated omics links the dominance of a microbial generalist to fine-tuned resource usage
Muller, Emilie; Pinel, Nicolás; Laczny, Cedric Christian; Hoopmann, Michael; Lebrun, Laura; Roume, Hugo; May, Patrick; Hicks, Nathan; Liu, Cindy; Price, Lance; Gillece, John; Guignard, Cédric; Schupp, James; Vlassis, Nikos; Moritz, Robert; Baliga, Nitin; Keim, Paul; Wilmes, Paul

Scientific Conference (2014)

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See detailCommunity-integrated omics links dominance of a microbial generalist to fine-tuned resource usage
Muller, Emilie; Pinel, Nicolas; Laczny, Cedric Christian; Hoopmann, Michael; Narayanasamy, Shaman; Lebrun, Laura; Roume, Hugo; Lin, Jake; May, Patrick; Hicks, Nathan; Buschart, Anna; Wampach, Linda; Liu, Cindy; Price, Lance; Gillece, John; Guignard, Cédric; Schupp, James; Vlassis, Nikos; Baliga; Moritz, Robert; Keim, Paul; Wilmes, Paul

in Nature Communications (2014)

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2013

See detailThe exogenous RNA spectrum in human plasma and the gastrointestinal tract
Dilimulati, Yusufujiangaili; Heintz, Anna; Ghosal, Anubrata; Upadhyaya, Bimal Babu; Fritz, Joëlle; Laczny, Cedric Christian; May, Patrick; Muller, Emilie; Shah, Pranjul; Desai, Mahesh; Roume, Hugo; Huang, D; Wang, K; Galas, David J.; Wilmes, Paul

Poster (2013, October)

See detailMeta-omic Analyses of the Microbiome in a Family Study of Diabetes Mellitus
Heintz, Anna; May, Patrick; Lebrun, Laura; Ferrand, J; Trezzi, Jean-Pierre; Collignon, S; Wampach, Linda; Glaab, Enrico; Laczny, Cedric Christian; Martins Conde, Patricia; Kaysen, Anne; Schneider, Jochen; Hiller, Karsten; Hogan, Angela; Wilmes, Paul; de Beaufort, Carine

Poster (2013, October)

See detailA model microbial community for Eco-Systems Biology
Muller, Emilie; Roume, Hugo; Buschart, Anna; Pinel, Nicolas; Laczny, Cedric Christian; Satagopam, Venkata; May, Patrick; Lebrun, Laura; Wilmes, Paul

Poster (2013)

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