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Shaman Narayanasamy

Shaman Narayanasamy

Postdoctoral researcher

Faculté ou Centre Luxembourg Centre for Systems Biomedicine
Department Bioinformatics Core
Adresse postale Université du Luxembourg
6, avenue du Swing
L-4367 Belvaux

Bureau sur le campus BTL, E04 070
Téléphone (+352) 46 66 44 5079

Postdoc in the Bioinformatics Core (R. Schneider Lab)

Last updated on: jeudi 08 avril 2021

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See detailChallenges, Strategies, and Perspectives for Reference-Independent Longitudinal Multi-Omic Microbiome Studies
Martinez Arbas, Susana; Busi, Susheel Bhanu; Teixeira Queirós, Pedro; de Nies, Laura; Herold, Malte; May, Patrick; Wilmes, Paul; Muller, Emilie; Narayanasamy, Shaman

in Frontiers in Genetics (2021)

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See detailRoles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics
Martinez Arbas, Susana; Narayanasamy, Shaman; Herold, Malte; Lebrun, Laura; Hoopmann, Michael R.; Li, Sujun; Lam, Tony J.; Kunath, Benoît J.; Hicks, Nathan D.; Liu, Cindy M.; Price, Lance B.; Laczny, Cedric Christian; Gillece, John D.; Schupp, James M.; Keim, Paul S.; Moritz, Robert L.; Faust, Karoline; Tang, Haixu; Ye, Yuzhen; Skupin, Alexander; May, Patrick; Muller, Emilie E. L.; Wilmes, Paul

in Nature Microbiology (2021), 6(1), 123--135

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See detailIntegrated time-resolved multi-omics for understanding microbial niche ecology
Herold, Malte; Narayanasamy, Shaman; Martinez Arbas, Susana; Muller, Emilie; Kleine-Borgmann, Anna Luise; Lebrun, Laura; Roume, Hugo; Sheik, Abdul; Bessarab, Irina; Williams, Rohan; Gillece, John; Schupp, Jim; Keim, Paul; Jäger, Christian; Hoopmann, Michael; Li, Sujun; Tang, Haixu; Heintz, Anna; May, Patrick; Laczny, Cedric Christian; Wilmes, Paul

Poster (2018, August)

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See detailMicrobiome-derived Multi-omicBiomarkers for Early-stage Detection and Stratification of Parkinson's Disease
Trezzi, Jean-Pierre; Heintz, Anna; Muller, Emilie; Narayanasamy, Shaman; Jarosz, Yohan; Herold, Malte; Kaysen, Anne; Laczny, Cedric Christian; May, Patrick; Wilmes, Paul

Poster (2018, August)

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See detailBirth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential
Wampach, Linda; Heintz, Anna; Fritz, Joëlle; Ramiro Garcia, Javier; Habier, Janine; Herold, Malte; Narayanasamy, Shaman; Kaysen, Anne; Hogan, Angela; Bindl, Lutz; Bottu, Jean; Halder, Rashi; Sjöqvist, Conny; May, Patrick; Andersson, Anders; de Beaufort, Carine; Wilmes, Paul

in Nature Communications (2018)

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See detailIntegrated meta-omic analyses of the gastrointestinal tract microbiome in patients undergoing allogeneic hematopoietic stem cell transplantation.
Kaysen, Anne; Heintz, Anna; Muller, Emilie; Narayanasamy, Shaman; Wampach, Linda; Laczny, Cedric C.; Graf, Norbert; Simon, Arne; Franke, Katharina; Bittenbring, Jörg; Wilmes, Paul; Schneider, Jochen

in Translational Research: the Journal of Laboratory and Clinical Medicine (2017)

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See detailFirst draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ
Muller, Emilie; Narayanasamy, Shaman; Zeimes, Myriam; Laczny, Cedric Christian; Lebrun, Laura; Herold, Malte; Hicks, Nathan D.; Gillice, John D.; Schupp, James M.; Keim, Paul; Wilmes, Paul

in Standards in Genomic Sciences (2017), 12(64),

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See detailColonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life
Wampach, Linda; Heintz, Anna; Hogan, Angela; Muller, Emilie; Narayanasamy, Shaman; Laczny, Cedric Christian; Hugerth, Luisa; Bindl, Lutz; Bottu, Jean; Andersson, Anders; de Beaufort, Carine; Wilmes, Paul

in Frontiers in Microbiology (2017)

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See detailCommunity-Reviewed Biological Network Models for Toxicology and Drug Discovery Applications.
Alex Namasivayam, Aishwarya; Morales, Alejandro Ferreiro; Lacave, Angela Maria Fajardo; Tallam, Aravind; Simovic, Borislav; Alfaro, David Garrido; Bobbili, Dheeraj Reddy; Martin, Florian; Androsova, Ganna; Shvydchenko, Irina; Park, Jennifer; Calvo, Jorge Val; Hoeng, Julia; Peitsch, Manuel C.; Racero, Manuel Gonzalez Velez; Biryukov, Maria; Talikka, Marja; Perez, Modesto Berraquero; Rohatgi, Neha; Diaz-Diaz, Noberto; Mandarapu, Rajesh; Ruiz, Ruben Amian; Davidyan, Sergey; Narayanasamy, Shaman; Boue, Stephanie; Guryanova, Svetlana; Arbas, Susana Martinez; Menon, Swapna; Xiang, Yang

in Gene regulation and systems biology (2016), 10

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See detailIMP: a pipeline for reproducible referenceindependent integrated metagenomic and metatranscriptomic analyses
Narayanasamy, Shaman; Jarosz, Yohan; Muller, Emilie; Buschart, Anna; Herold, Malte; Kaysen, Anne; Laczny, Cedric Christian; Pinel, Nicolás; May, Patrick; Wilmes, Paul

in Genome Biology (2016), 17

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See detailDynamic change of host gastrointestinal microbiome and immune status in relation to mucosal barrier effects during chemotherapy and immune ablative intervention in humans.
Kaysen, Anne; Buschart, Anna; May, Patrick; Laczny, Cedric Christian; Narayanasamy, Shaman; Graf, N; Simon, A; Bittenbring, J; Kreis, Stephanie; Schneider, Jochen; Wilmes, Paul

Poster (2015, June)

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See detailIntegrated omics for the identification of key functionalities in biological wastewater treatment microbial communities
Narayanasamy, Shaman; Muller, Emilie; Sheik, Abdul; Wilmes, Paul

in Microbial Biotechnology (2015)

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See detailComparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks
Roume, Hugo; Buschart, Anna; Muller, Emilie; May, Patrick; Satagopam, Venkata; Laczny, Cedric Christian; Narayanasamy, Shaman; Lebrun, Laura; Hoopmann, Michael; Schupp, James; Gillece, John; Hicks, Nathan; Engelthaler, David; Sauter, Thomas; Keim, Paul; Moritz, Robert; Wilmes, Paul

in Biofilms and Microbiomes (2015), 1(15007),

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See detailCommunity-integrated omics links dominance of a microbial generalist to fine-tuned resource usage
Muller, Emilie; Pinel, Nicolas; Laczny, Cedric Christian; Hoopmann, Michael; Narayanasamy, Shaman; Lebrun, Laura; Roume, Hugo; Lin, Jake; May, Patrick; Hicks, Nathan; Buschart, Anna; Wampach, Linda; Liu, Cindy; Price, Lance; Gillece, John; Guignard, Cédric; Schupp, James; Vlassis, Nikos; Baliga; Moritz, Robert; Keim, Paul; Wilmes, Paul

in Nature Communications (2014)

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