Rashi Halder
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| Faculté ou Centre | Luxembourg Centre for Systems Biomedicine | ||||
| Department | Scientific Central Services | ||||
| Adresse postale |
Campus Belval, Université du Luxembourg 7, Avenue des Hauts Fourneaux L-4362 Esch-sur-Alzette |
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| Bureau sur le campus | BioTech I, 5.09B | ||||
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| Téléphone | (+352) 46 66 44 6189 | ||||
Sequencing platform manager in the Systems Ecology group (Wilmes Lab)
Last updated on: mardi 30 juin 2020
2023
Altered infective competence of the human gut microbiome in COVID-19; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Microbiome (2023), 11(1), 46
Systems level analysis of sex-dependent gene expression changes in Parkinson’s disease; ;
in NPJ Parkinson's Disease (2023), 9(8),
2022
Single-cell transcriptional profiling and gene regulatory network modeling in Tg2576 mice reveal gender-dependent molecular features preceding Alzheimer-like pathologies; ; ; ; ; ; ; ; ;
in Molecular Neurobiology (2022), in press (doi:10.1007/s12035-022-02985-2)(in press),
RvD1(n-3 DPA) Downregulates the Transcription of Pro-Inflammatory Genes in Oral Epithelial Cells and Reverses Nuclear Translocation of Transcription Factor p65 after TNF-α Stimulation.; ; ; ; ; ; ; ;
in International journal of molecular sciences (2022), 23(23),
Evolution of the murine gut resistome following broad-spectrum antibiotic treatment.; ; ; ; ;
in Nature communications (2022), 13(1), 2296
Forecasting of a complex microbial community using meta-omics; ; ; ; ; ; ; ; ;
E-print/Working paper (2022)
Alterations of oral microbiota and impact on the gut microbiome in type 1 diabetes mellitus revealed by integrated multi-omic analyses; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Microbiome (2022)
An archaeal compound as a driver of Parkinson’s disease pathogenesis; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
E-print/Working paper (2022)
2021
Persistence of birth mode-dependent effects on gut microbiome composition, immune system stimulation and antimicrobial resistance during the first year of life; ; ; ; ; ; ; ; ;
in ISME Communications (2021)
Systematic characterization of human gut microbiome-secreted molecules by integrated multi-omics; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in ISME Communications (2021)
Functional meta-omics provide critical insights into long- and short-read assemblies; ; ; ; ; ; ; ;
in Briefings in Bioinformatics (2021)
Single-Cell Transcriptomics and In Situ Morphological Analyses Reveal Microglia Heterogeneity Across the Nigrostriatal Pathway; ; ; ; ; ; ; ; ;
in Frontiers in Immunology (2021)
Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Nature Communications (2021), 12(1), 7305
2020
Optimised biomolecular extraction for metagenomic analysis of microbial biofilms from high-mountain streams; ; ; ; ; ; ;
in PeerJ (2020)
Integrative omics analysis of the termite gut system adaptation to Miscanthus diet identifies lignocellulose degradation enzymes.; ; ; ; ; ; ; ; ; ; ; ; ;
in Communications Biology (2020)
Synapse alterations precede neuronal damage and storage pathology in a human cerebral organoid model of CLN3-juvenile neuronal ceroid lipofuscinosis; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Acta Neuropathologica Communications (2020)
Pituitary Tumor Transforming Gene 1 Orchestrates Gene Regulatory Variation in Mouse Ventral Midbrain During Aging; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Frontiers in Genetics (2020)
Dichloromethane Degradation Pathway from Unsequenced Hyphomicrobium sp. MC8b Rapidly Explored by Pan-Proteomics; ; ; ; ; ; ; ; ; ; ;
in Microorganisms (2020)
Glutathione Restricts Serine Metabolism to Preserve Regulatory T Cell Function; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Cell Metabolism (2020), 31(5), 920--9367
Compositional and functional characterisation of biomass-degrading microbial communities in guts of plant fibre- and soil-feeding higher termites.; ; ; ; ; ; ; ; ;
in Microbiome (2020)
Developmental GABA polarity switch and neuronal plasticity in Bioengineered Neuronal Organoids; ; ; ; ; ; ; ;
in Nature Communications (2020), 11(1), 3791
2019
Integrated In Vitro and In Silico Modeling Delineates the Molecular Effects of a Synbiotic Regimen on Colorectal-Cancer-Derived Cells; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Cell Reports (2019), 27
Impaired serine metabolism complements LRRK2-G2019S pathogenicity in PD patients; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Parkinsonism and Related Disorders (2019)
2018
Temporal enhancer profiling of parallel lineages identifies AHR and GLIS1 as regulators of mesenchymal multipotency; ; ; ; ; ; ; ;
in Nucleic Acids Research (2018)
Cominatorial effect of dietary fibre and Lactobacillus rhamnosus in the context of colorectal cancer therapy; ; ; ; ; ; ; ; ; ;
Poster (2018, February 16)
Cytokine-mediated modulation of the hepatic miRNome: miR-146b-5p is an IL-6-inducible miRNA with multiple targets.; ; ; ; ; ; ; ; ; ; ;
in Journal of leukocyte biology (2018)
The RNA Complement of Outer Membrane Vesicles From Salmonella enterica Serovar Typhimurium Under Distinct Culture Conditions; ; ; ; ; ; ; ; ;
in Frontiers in Microbiology (2018), 9
Alpha-synuclein deregulates the expression of COL4A2 and impairs ER-Golgi function; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Neurobiology of Disease (2018)
miR-182-5p and miR-183-5p Act as GDNF Mimics in Dopaminergic Midbrain Neurons.; ; ; ; ; ; ; ; ;
in Molecular Therapy: Nucleic Acids (2018)
Microbiome-derived Multi-omicBiomarkers for Early-stage Detection and Stratification of Parkinson's Disease; ; ; ; ; ; ; ; ;
Poster (2018, October)
Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Nature Communications (2018)
2017
HDAC1 links early life stress to schizophrenia-like phenotypes.; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Proceedings of the National Academy of Sciences of the United States of America (2017)
TRPV1 regulates excitatory innervation of OLM neurons in the hippocampus.; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Nature Communications (2017)
KMT2A and KMT2B Mediate Memory Function by Affecting Distinct Genomic Regions; ; ; ; ; ; ; ; ; ; ; ; ;
in Cell Reports (2017)
2016
Genome-wide chromatin and gene expression profiling during memory formation and maintenance in adult mice; ; ; ; ; ;
in Scientific Data (2016)
2015
DNA methylation changes in plasticity genes accompany the formation and maintenance of memory; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Nature Neuroscience (2015)
