Piotr Gawron

Piotr Gawron

Postdoctoral researcher / Research associate

Faculté ou Centre Luxembourg Centre for Systems Biomedicine
Department Bioinformatics Core
Adresse postale Université du Luxembourg
2, Avenue de l'Université
L-4365 Esch-sur-Alzette
E-mail
Téléphone (+352) 46 66 44 5526

Postdoc in the Bioinformatics Core group (R. Schneider Lab)

Last updated on: mercredi 02 septembre 2015

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2022

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See detailSMASCH: Facilitating multi-appointment scheduling in longitudinal clinical research studies and care programs
Vega Moreno, Carlos Gonzalo; Gawron, Piotr; Lebioda, Jacek; Groues, Valentin; Krüger, Rejko; Schneider, Reinhard; Satagopam, Venkata

Poster (2022, September 20)

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See detailSmart Scheduling (SMASCH): multi-appointment scheduling system for longitudinal clinical research studies.
Vega Moreno, Carlos Gonzalo; Gawron, Piotr; Lebioda, Jacek; Groues, Valentin; Matyjaszczyk, Piotr; Pauly, Claire; Smula, Ewa; Krüger, Rejko; Schneider, Reinhard; Satagopam, Venkata

in JAMIA open (2022), 5(2), 038

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2021

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See detailPredictProtein - Predicting Protein Structure and Function for 29 Years
Bernhofer, Michael; Dallago, Christian; Karl, Tim; Satagopam, Venkata; Heinzinger, Michael; Littmann, Maria; Olenyi, Tobias; Qiu, Jiajun; Schütze, Konstantin; Yachdav, Guy; Ashkenazy, Haim; Ben-Tal, Nir; Bromberg, Yana; Goldberg, Tatyana; Kajan, Laszlo; O’Donoghue, Sean; Sander, Chris; Schafferhans, Andrea; Schlessinger, Avner; Vriend, Gerrit; Mirdita, Milot; Gawron, Piotr; Gu, Wei; Jarosz, Yohan; Trefois, Christophe; Steinegger, Martin; Schneider, Reinhard; Rost, Burkhard

in Nucleic Acids Research (2021)

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See detailCOVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.
Ostaszewski, Marek; Niarakis, Anna; Mazein, Alexander; Kuperstein, Inna; Phair, Robert; Orta-Resendiz, Aurelio; Singh, Vidisha; Aghamiri, Sara Sadat; Acencio, Marcio Luis; Glaab, Enrico; Ruepp, Andreas; Fobo, Gisela; Montrone, Corinna; Brauner, Barbara; Frishman, Goar; Monraz Gómez, Luis Cristóbal; Somers, Julia; Hoch, Matti; Kumar Gupta, Shailendra; Scheel, Julia; Borlinghaus, Hanna; Czauderna, Tobias; Schreiber, Falk; Montagud, Arnau; Ponce de Leon, Miguel; Funahashi, Akira; Hiki, Yusuke; Hiroi, Noriko; Yamada, Takahiro G.; Dräger, Andreas; Renz, Alina; Naveez, Muhammad; Bocskei, Zsolt; Messina, Francesco; Börnigen, Daniela; Fergusson, Liam; Conti, Marta; Rameil, Marius; Nakonecnij, Vanessa; Vanhoefer, Jakob; Schmiester, Leonard; Wang, Muying; Ackerman, Emily E.; Shoemaker, Jason E.; Zucker, Jeremy; Oxford, Kristie; Teuton, Jeremy; Kocakaya, Ebru; Summak, Gökçe Yağmur; Hanspers, Kristina; Kutmon, Martina; Coort, Susan; Eijssen, Lars; Ehrhart, Friederike; Rex, Devasahayam Arokia Balaya; Slenter, Denise; Martens, Marvin; Pham, Nhung; Haw, Robin; Jassal, Bijay; Matthews, Lisa; Orlic-Milacic, Marija; Senff Ribeiro, Andrea; Rothfels, Karen; Shamovsky, Veronica; Stephan, Ralf; Sevilla, Cristoffer; Varusai, Thawfeek; Ravel, Jean-Marie; Fraser, Rupsha; Ortseifen, Vera; Marchesi, Silvia; Gawron, Piotr; Smula, Ewa; Heirendt, Laurent; Satagopam, Venkata; Wu, Guanming; Riutta, Anders; Golebiewski, Martin; Owen, Stuart; Goble, Carole; Hu, Xiaoming; Overall, Rupert W.; Maier, Dieter; Bauch, Angela; Gyori, Benjamin M.; Bachman, John A.; Vega, Carlos; Groues, Valentin; Vazquez, Miguel; Porras, Pablo; Licata, Luana; Iannuccelli, Marta; Sacco, Francesca; Nesterova, Anastasia; Yuryev, Anton; de Waard, Anita; Turei, Denes; Luna, Augustin; Babur, Ozgun; Soliman, Sylvain; Valdeolivas, Alberto; Esteban-Medina, Marina; Peña-Chilet, Maria; Rian, Kinza; Helikar, Tomáš; Puniya, Bhanwar Lal; Modos, Dezso; Treveil, Agatha; Olbei, Marton; De Meulder, Bertrand; Ballereau, Stephane; Dugourd, Aurélien; Naldi, Aurélien; Noël, Vincent; Calzone, Laurence; Sander, Chris; Demir, Emek; Korcsmaros, Tamas; Freeman, Tom C.; Augé, Franck; Beckmann, Jacques S.; Hasenauer, Jan; Wolkenhauer, Olaf; Wilighagen, Egon L.; Pico, Alexander R.; Evelo, Chris T.; Gillespie, Marc E.; Stein, Lincoln D.; Hermjakob, Henning; D'Eustachio, Peter; Saez-Rodriguez, Julio; Dopazo, Joaquin; Valencia, Alfonso; Kitano, Hiroaki; Barillot, Emmanuel; Auffray, Charles; Balling, Rudi; Schneider, Reinhard

in Molecular systems biology (2021), 17(10), 10387

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2020

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See detailIntegrative omics analysis of the termite gut system adaptation to Miscanthus diet identifies lignocellulose degradation enzymes.
Calusinska, Magdalena; Marynowska, Martyna; Bertucci, Marie; Untereiner, Boris; Klimek, Dominika; Goux, Xavier; Sillam-Dusses, David; Gawron, Piotr; Halder, Rashi; Wilmes, Paul; Ferrer, Pau; Gerin, Patrick; Roisin, Yves; Delfosse, Philippe

in Communications Biology (2020)

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See detailCompositional and functional characterisation of biomass-degrading microbial communities in guts of plant fibre- and soil-feeding higher termites.
Marynowska, Martyna; Goux, Xavier; Sillam-Dusses, David; Rouland-Lefevre, Corinne; Halder, Rashi; Wilmes, Paul; Gawron, Piotr; Roisin, Yves; Delfosse, Philippe; Calusinska, Magdalena

in Microbiome (2020)

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2019

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See detailClosing the gap between formats for storing layout information in systems biology.
Hoksza, David; Gawron, Piotr; Ostaszewski, Marek; Hausenauer, Jan; Schneider, Reinhard

in Briefings in bioinformatics (2019)

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See detailMINERVA API and plugins: opening molecular network analysis and visualization to the community.
Hoksza, David; Gawron, Piotr; Ostaszewski, Marek; Smula, Ewa; Schneider, Reinhard

in Bioinformatics (2019)

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2018

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See detailMolArt: a molecular structure annotation and visualization tool
Hoksza, David; Gawron, Piotr; Ostaszewski, Marek; Schneider, Reinhard

in Bioinformatics (2018)

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See detailSystems medicine disease maps: community-driven comprehensive representation of disease mechanisms.
Mazein, Alexander; Ostaszewski, Marek; Kuperstein, Inna; Watterson, Steven; Le Novere, Nicolas; Lefaudeux, Diane; De Meulder, Bertrand; Pellet, Johann; Balaur, Irina; Saqi, Mansoor; Nogueira, Maria Manuela; He, Feng; Parton, Andrew; Lemonnier, Nathanael; Gawron, Piotr; Gebel, Stephan; Hainaut, Pierre; Ollert, Markus; Dogrusoz, Ugur; Barillot, Emmanuel; Zinovyev, Andrei; Schneider, Reinhard; Balling, Rudi; Auffray, Charles

in NPJ systems biology and applications (2018), 4

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See detailThe Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease
Noronha, Alberto; Modamio Chamarro, Jennifer; Jarosz, Yohan; Guerard, Elisabeth; Sompairac, Nicolas; Preciat Gonzalez, German Andres; Danielsdottir, Anna Dröfn; Krecke, Max; Merten, Diane; Haraldsdottir, Hulda; Heinken, Almut Katrin; Heirendt, Laurent; Magnusdottir, Stefania; Ravcheev, Dmitry; Sahoo, Swagatika; Gawron, Piotr; Friscioni, Lucia; Garcia Santa Cruz, Beatriz; Prendergast, Mabel; Puente, Alberto; Rodrigues, Mariana; Roy, Akansha; Mouss, Rouquaya; Wiltgen, Luca; Zagare, Alise; John, Elisabeth; Krüger, Maren; Kuperstein, Inna; Zinovyev, Andrei; Schneider, Reinhard; Fleming, Ronan MT; Thiele, Ines

in Nucleic Acids Research (2018)

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See detailCommunity-driven roadmap for integrated disease maps.
Ostaszewski, Marek; Gebel, Stephan; Kuperstein, Inna; Mazein, Alexander; Zinovyev, Andrei; Dogrusoz, Ugur; Hasenauer, Jan; Fleming, Ronan MT; Le Novere, Nicolas; Gawron, Piotr; Ligon, Thomas; Niarakis, Anna; Nickerson, David; Weindl, Daniel; Balling, Rudi; Barillot, Emmanuel; Auffray, Charles; Schneider, Reinhard

in Briefings in bioinformatics (2018)

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2016

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See detailReconMap: An interactive visualisation of human metabolism
Noronha, Alberto; Danielsdóttir, Anna Dröfn; Jóhannsson, Freyr; Jónsdóttir, Soffia; Jarlsson, Sindri; Gunnarsson, Jón Pétur; Brynjólfsson, Sigurður; Gawron, Piotr; Schneider, Reinhard; Thiele, Ines; Fleming, Ronan MT

in Bioinformatics (2016)

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2015

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See detailVizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data
Laczny, Cedric Christian; Sternal, Tomasz; Plugaru, Valentin; Gawron, Piotr; Atashpendar, Arash; Margossian, Houry Hera; Coronado, Sergio; van der Maaten, Laurens; Vlassis, Nikos; Wilmes, Paul

in Microbiome (2015)

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2014

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See detailG-DNA – a highly efficient multi-GPU/MPI tool for aligning nucleotide reads
Gawron, Piotr; Frohmberg, W; Kierzynka, M; Blazewicz, J; Wojciechowski, P

in Bulletin of the Polish Academy of Sciences. Technical Sciences (2014)

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2013

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